https://dralperenuysal.r-universe.devRecent package updates in dralperenuysalR-universehttps://github.com/dralperenuysal.pnghttps://dralperenuysal.r-universe.devThu, 08 Oct 2026 09:47:43 GMTdralperenuysal@gmail.com (Alperen Uysal)Provides a single SummarizedExperiment-based interface to published circadian phase (time-of-sample-collection) inference methods for bulk and donor-level pseudobulk transcriptomes, along with a shared cross-validation benchmarking harness, cross-dataset transfer testing, and a calibrated uncertainty layer: bootstrap and Bayesian confidence intervals validated for real coverage, a fixed or dynamically-selected clock-gene quality flag, and consensus phase estimation across every bundled engine. Does not implement a new phase-inference algorithm; unifies existing published methods that are otherwise scattered across incompatible standalone implementations.https://github.com/r-universe/biocstaging/actions/runs/37775193905Thu, 08 Oct 2026 09:47:43 GMTcircaTime0.99.3successhttps://biocstaging.r-universe.devhttps://github.com/BiocStaging/circaTimecircaTime.RmdcircaTime.htmlIntroduction to circaTime2026-08-12 18:39:562026-08-14 18:07:11